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Storage Systems and I/O: Organizing, Storing, and Accessing Data for Scientific Discovery

Storage Systems and I/O: Organizing, Storing, and Accessing Data for Scientific Discovery

Storage Systems and I/O: Organizing, Storing, and Accessing Data for Scientific Discovery, Robert Ross, Lee Ward, Philip Carns, Gary Grider, Scott Klasky, Quincey Koziol, Glenn K. Lockwood, Kahthryn Mohror, Bradley Settlemyer, and Matthew Wolf, United States: N. p., 2019. Web. doi:10.2172/1491994.

Google brought this to my attention recently because I’ve set triggers for people citing prior…

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To FUSE or Not to FUSE: Performance of User-Space File Systems

To FUSE or Not to FUSE: Performance of User-Space File Systems

To FUSE or Not to FUSE: Performance of User-Space File Systems Bharath Kumar Reddy Vangoor, Vasily Tarasov, and Erez Zadok, in The 15th USENIX Conference on File and Storage Technologies (FAST ’17), February 27 – March 2, 2017, Santa Clara, CA, USA.

Previously, I discussed some of the rationale behind FUSE and a basic introduction to why we use it. This paper is actually a detailed analysis of the

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FUSE: File Systems in User Space

FUSE: File Systems in User Space

File systems are notoriously difficult to implement: of all the pieces that appear in an operating system, they have the highest quality bar and are often called upon more than almost any other part of the operating system; virtual memory management may be called upon more.

Of course, the fact that modern operating systems tend to make the boundaries of file systems and virtual memory a bit…

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File System Driver: Create

File System Driver: Create

The road ahead.

The usual place to start when building a file system is to think about the Create operation. This may also be referred to as an open operation, but that conflates the object with the handle.

I think of Create as being “create a handle to the object”. The creation of the object itself can be a side effectof creating the handle; it does not make much sense to create a handle…

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What About POSIX?

Has POSIX ceased to be relevant?

The POSIX specification was originally written to codify existing practice in UNIX. While it was called the PORTABLE Operating Systems Interface, it really set out to create that interface by documenting existing UNIX practice. While POSIX has certainly evolved, it has done so slowly.

But I’m not trying to dive into another polemic on the weaknesses of…

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What is a File System?

What is a File System?

I don’t know if I’ve discussed this previously, but if so, feel free to skip it. I had a meeting with one of my supervisors this morning and he observed that something I pointed out “would make a great HotOS paper…” I’m pretty much off the hook on that one, since there won’t be another HotOS for almost two years.

Copyright 2016 Skyworks Digital, Inc.

I said “we conflate name spaces and…

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File System Driver: Structure

File System Driver: Structure

I thought I would discuss the structure of my driver and why I chose to structure it the way that I have done. Of course, I could change the structure of the driver again, but I will need to see a compelling reason to do so.

First, I will note that the driver has changed since I last wrote about it. I was not entirely happy with what I saw as a bit too much complexity, some of which is just…

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Visualization

Visualization of File System Data

Last post I discussed relationships. But relationships really are not enough. Another key to this puzzle is visualization. In other words, how do we present the information to users so that it is useful.

But first, let me step back and point to a larger problem: information overload. If we present users with a list of 100,000 options, they won’t be able to necessarily find what they’re…

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Relationships

I recently described two file systems (QMDS and GFS) that attempted to capture additional context for files to improve their usability. At Eurosys, I argued (somewhat successfully) that a distinguishing characteristic of my proposed work is to capture relationships between files, something that goes beyond mere isolated analysis of such files.

Index servers, which are now ubiquitous on…

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Setting up Debugging

No matter how many times I do this over the years, I find it to be a slow and painful process – install a clean virtual machine image, set up kernel debugging, install the (test signed) driver.

It never ceases to amaze me how non-intuitive it is to set up talkto the new VM image that I’ve set up on my computer. This time was certainly no exception. Since I’m running on Windows 10, I choose to…

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Starting the Skeleton Driver

Starting the Skeleton Driver

Screen shot of my newly created skeleton driver

In my last post, I installed the WDK (and described why I want to build a file system driver). I started up Visual Studio 2019, said I wanted to create a new project, narrowed down the options to “WDK” related projects, and scrolled down to the WDM driver option.

I’m not building a WDM driver, but it is the closest project type to what I want…

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Let's Build a Windows File System

Let’s Build a Windows File System

It’s been a while since I upgraded my Windows kernel development tools, so I thought I’d write about the steps I’m taking to do so. How you build a Windows file system has changed over the years but the basic structure of the file system driver itself has not.

At the time I’m writing this, the standard tools to do this are the Microsoft Visual Studio Integrated Development Environment and…

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GFS: a Graph-based File System Enhanced with Semantic Features

GFS: a Graph-based File System Enhanced with Semantic Features

GFS: a Graph-based File System Enhanced with Semantic Features Daniele Di Sarli and Filippo Geraci, Proceedings of the 2017 International Conference on Information System and Data Mining, pp. 51-55, Charleston, SC, US.

In this paper we describe GFS (graph-based file system) a new hybrid file system that extends the standard hierarchical organization of files with semantic features. GFS allows…

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Graph File Systems

We submitted a paper to HotOS 2019 in which we (unsuccessfully) made the argument that file systems as hierarchies is hobbling our ability to enhance the usability of file systems.

One of the blind reviews pointed to a pair of papers, one of which I’ve already reviewed(I’ll review the other, but I didn’t consider it to be the same thing, except vaguely in name as it ends up being a semantic…

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Collaboration versus Cheating

Collaboration Versus Cheating: Reducing Code Plagiarism in an Online MS Computer Science Program Tony Mason, Ada Gavrilovska, and David A. Joyner, Proceedings of the 50th ACM Technical Symposium on Computer Science Education, pp. 1004-1010, Minneapolis, MN, February 27 – March 2, 2019.

This is a rather different paper than my usual but I thought I would write about it since I was the one that…

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QMDS: A File System Metadata Management Service Supporting a Graph Data Model-based Query Language

QMDS: A File System Metadata Management Service Supporting a Graph Data Model-based Query Language

QMDS: A File System Metadata Management Service Supporting a Graph Data Model-based Query Language Sasha Ames, Maya B. Gokhale, and Carlos Maltzahn, International Journal of Parallel, Emergent and Distributed Systems, Volume 28, Number 2, pp. 159-183, 2013.

This paper came to my attention via feedback from an anonymous reviewer, observing that our idea of constructing a graph file system had…

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The Ubiquitous Digital File: A Review of File Management Research

The Ubiquitous Digital File: A Review of File Management Research

The Ubiquitous Digital File: A Review of File Management Research

Jesse David Dinneen and Charles-Antoine Julien, Journal of the Association for Information Science and Technology, April 12, 2019.

I recently stumbled across this recent paper, which I found to be very useful and timely for my current project. As I mentioned in my recent post about Eurosys 2019, I am looking at how we can do…