much more context with an episode list below the poll!
more info below by episode (forgive me in advance if i forgot your favorite doctor-evolution episode) (also forgive me for all the mistakes i will immediately see once i hit post but will be unable to fix because we can't edit poll posts):
season one: "i wasn't programmed for any of this!"
"eye of the needle": after kes starts advocating for him, janeway offers him the power to turn himself off, and he asks for a name.
"heroes and demons": he leaves sickbay for the first time and has his first non-medical mission. he's emotionally affected by freya's death at the end.
season two: "before you, i was just a projection of photons held together by forcefields [...] just a profession, not a life."
"projections": he hallucinates an existential crisis about whether he's a human or a hologram.
"twisted": the doctor spends time recreationally with the crew on the holodeck for the first time (though it's not clear if he enjoys it).
"lifesigns": he falls in love with vidiian doctor danara pel. at first he says his program is malfunctioning, but later believes his programming is adapting instead. he also records his first personal log.
season three: "i'm footloose and fancy-free."
"the swarm": his program starts to degrade because he has been expanding it for hobbies like opera and friendships with the crew. he says his program should be rebooted so he can serve his "primary responsibility," but kes and the others convince him that his memories are important to keep. (factoid: we learn his maximum runtime was supposed to be 1500 hours.)
"future's end": mobile emitter time!!! and his first time off the ship.
"darkling": he starts editing his own program (and it doesn't go well).
"real life": he creates a holo-family for himself.
according to the stardate mentioned in "latent image" (see season five), the flashback part of that episode happens at the very end of season three.
season four: "i believe i've earned the respect of the crew as an equal."
"revulsion": we meet our first delta quadrant hologram (and it doesn't go well). this is the first time we hear about holograms being subjugated by "organics."
"message in a bottle": the doctor meets the EMH-2 and reveals that at some point he programmed himself a dick and had sex.
"living witness": we learn that the doctor has a backup module who seems to have the same emotions and self-awareness as the doctor himself (which i take to mean that whatever sentience is now in his program can be duplicated by copying).
season five: "we gave him a soul. do we have any right to take it away now?"
"latent image": we learn the doctor had a holo-breakdown (off-screen in late season 3) after his ethical subroutines could not reconcile his decision to save harry's life over another patient's. at the time, they determined that erasing some of his memories was the only way to repair him. at the end of the episode, after the doctor and seven both argue for his individual rights, janeway decides to let him work through his guilt rather than deleting his memories again. assuming this ultimately works after the episode ends, it means that he was able to overcome a critical programming conflict through introspection and social support instead of altering his programming.
season six: "haven't I earned the right to self-determination?"
"tinker, tenor, doctor, spy": the doctor formally complains that his sentience is not being acknowledged and argues that he should be allowed to grow his abilities beyond his role as doctor. he also wants his potential to be evaluated based on his holographic nature rather than humanoid limits ("my program can be expanded indefinitely. i don't have limits!").
"blink of an eye": he lives for three years on the time dilation planet and even has a son ("it's a long story").
"virtuoso": he tries to leave the ship to become an opera star, choosing his passion (and his ego) over his originally programmed purpose.
side note: "fair haven" and "spirit folk" are both in season six, and that's the first time that anyone (including the doctor) seems to consider the concept that regular holodeck characters might also have some kind of feelings, personhood, or right to continued existence (unlike in season three, when in "alter ego" it's both a joke and a problem that harry falls in love with a hologram, or in "real life" when the doctor is fine with b'elanna reprogramming his family without consulting them).
season seven: "the doctor exhibits many of the traits we associate with a person [...] but are these traits real, or is the doctor merely programmed to simulate them?"
"critical care": the doctor violates the hippocratic oath in his programming by harming a patient to save others, and it does not trigger the ethical subroutine breakdown he experienced in season 5.
"body and soul": delta quadrant holograms are in revolt. the doctor experiences humanoid pleasures and enjoys them.
"flesh and blood": he betrays voyager to save the hirogen-programmed holograms and (temporarily) leaves the ship to join them, "because i'm one of you."
"author, author": a federation arbiter decides that he's not legally a person, but is "no ordinary hologram" and has some limited rights.
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random thought but i love the idea of Herobrine being less of an explicitly evil character and more of a weird cryptid thing that exists by accident and can only be perceived at long FOV distances by humans, forever being sort of isolated from the rest of them to only be seen partially obscured by the fog. he physically exists, but can only be perceived as though he were a ghost. he's very curious about other humans, watching over them as they traverse the world, but he means no harm. this can often look like stalking behaviour which can freak other humans out and make him seem menacing or off putting. scrambled throughout the world are legends and scriptures written about this mysterious being that make him out to be terrifying and threatening. warnings, spells and summoning rituals are seen scratched across the walls of ancient catacombs and ruined civilisations. locked inside dusty chests are torn and withered parchments scribbled with illustrations that depict him to be some sort of monstrous eldritch creature, perhaps mistaking something more terrifying for the legends of the strange man all should beware that have persisted for centuries. others depict him more as a silent, stalking shadowed figure, lurking behind trees and mountains with unknown intentions.
the only reason he exists is because of a strange bug that causes a duplicate of the main player to generate along with the world, and no matter how many times the developers of Minecraft try to remove him, he always quietly comes back somehow, implying that the rules of the game they created has developed into its own ecosystem that is slowly developing its own independence separate from the game, and that Herobrine is an integral part of it. he might possibly be a remnant of an ancient experiment or society that has long since disappeared, but for whatever reason, Herobrine still persists.
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